Pandas: 错误:如果使用现有索引,则MultiIndex的数据透视失败。

创建于 2018-11-27  ·  5评论  ·  资料来源: pandas-dev/pandas

代码示例,可复制示例

df  = pd.DataFrame([['A', 'A1', 'label1', 1],
             ['A', 'A2', 'label2', 2],
             ['B', 'A1', 'label1', 3],
             ['B', 'A2', 'label2', 4]], columns=['index_1', 'index_2', 'label', 'value'])
df = df.set_index(['index_1', 'index_2'])

pivoted_df = df.pivot(index=None,
                     columns='label',
                     values = 'value')

问题描述

枢轴函数给出错误NotImplementedError: isna is not defined for MultiIndex 。 当index设置为None


---------------------------------------------------------------------------
NotImplementedError                       Traceback (most recent call last)
<ipython-input-84-54426dadf31d> in <module>()
      2 pivoted_df = df.pivot(index=None,
      3                      columns='label',
----> 4                      values = 'value')

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\frame.py in pivot(self, index, columns, values)
   5192         """
   5193         from pandas.core.reshape.reshape import pivot
-> 5194         return pivot(self, index=index, columns=columns, values=values)
   5195 
   5196     _shared_docs['pivot_table'] = """

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\reshape\reshape.py in pivot(self, index, columns, values)
    404         else:
    405             index = self[index]
--> 406         index = MultiIndex.from_arrays([index, self[columns]])
    407 
    408         if is_list_like(values) and not isinstance(values, tuple):

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\indexes\multi.py in from_arrays(cls, arrays, sortorder, names)
   1272         from pandas.core.arrays.categorical import _factorize_from_iterables
   1273 
-> 1274         labels, levels = _factorize_from_iterables(arrays)
   1275         if names is None:
   1276             names = [getattr(arr, "name", None) for arr in arrays]

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\arrays\categorical.py in _factorize_from_iterables(iterables)
   2541         # For consistency, it should return a list of 2 lists.
   2542         return [[], []]
-> 2543     return map(list, lzip(*[_factorize_from_iterable(it) for it in iterables]))

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\arrays\categorical.py in <listcomp>(.0)
   2541         # For consistency, it should return a list of 2 lists.
   2542         return [[], []]
-> 2543     return map(list, lzip(*[_factorize_from_iterable(it) for it in iterables]))

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\arrays\categorical.py in _factorize_from_iterable(values)
   2513         codes = values.codes
   2514     else:
-> 2515         cat = Categorical(values, ordered=True)
   2516         categories = cat.categories
   2517         codes = cat.codes

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\arrays\categorical.py in __init__(self, values, categories, ordered, dtype, fastpath)
    359 
    360             # we're inferring from values
--> 361             dtype = CategoricalDtype(categories, dtype.ordered)
    362 
    363         elif is_categorical_dtype(values):

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\dtypes\dtypes.py in __init__(self, categories, ordered)
    136 
    137     def __init__(self, categories=None, ordered=None):
--> 138         self._finalize(categories, ordered, fastpath=False)
    139 
    140     <strong i="12">@classmethod</strong>

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\dtypes\dtypes.py in _finalize(self, categories, ordered, fastpath)
    161         if categories is not None:
    162             categories = self.validate_categories(categories,
--> 163                                                   fastpath=fastpath)
    164 
    165         self._categories = categories

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\dtypes\dtypes.py in validate_categories(categories, fastpath)
    318         if not fastpath:
    319 
--> 320             if categories.hasnans:
    321                 raise ValueError('Categorial categories cannot be null')
    322 

pandas\_libs\properties.pyx in pandas._libs.properties.CachedProperty.__get__()

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\indexes\base.py in hasnans(self)
   2237         """ return if I have any nans; enables various perf speedups """
   2238         if self._can_hold_na:
-> 2239             return self._isnan.any()
   2240         else:
   2241             return False

pandas\_libs\properties.pyx in pandas._libs.properties.CachedProperty.__get__()

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\indexes\base.py in _isnan(self)
   2218         """ return if each value is nan"""
   2219         if self._can_hold_na:
-> 2220             return isna(self)
   2221         else:
   2222             # shouldn't reach to this condition by checking hasnans beforehand

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\dtypes\missing.py in isna(obj)
    104     Name: 1, dtype: bool
    105     """
--> 106     return _isna(obj)
    107 
    108 

~\AppData\Local\Continuum\anaconda3\lib\site-packages\pandas\core\dtypes\missing.py in _isna_new(obj)
    115     # hack (for now) because MI registers as ndarray
    116     elif isinstance(obj, ABCMultiIndex):
--> 117         raise NotImplementedError("isna is not defined for MultiIndex")
    118     elif isinstance(obj, (ABCSeries, np.ndarray, ABCIndexClass,
    119                           ABCExtensionArray)):

NotImplementedError: isna is not defined for MultiIndex

预期产量

index_1 | index_2 | 标签1 | 标签2
-| -| -| -
A | A1 | 1.0 | N
|| A2 | NaN | 2.0
B | A1 | 3.0 | N
|| A2 | NaN | 4.0

pd.show_versions()

安装的版本

提交:无
的Python:3.6.5.final.0
python位:64
操作系统:Windows
操作系统版本:10
机器:AMD64
处理器:Intel64家族6型号85 Stepping 4,原装Intel
字节序:小
LC_ALL:无
朗:无
地点:无。

熊猫:0.23.4
pytest的:3.5.1
点:10.0.1
设置工具:39.1.0
Cython:0.28.2
numpy的:1.15.4
scipy:1.1.0
pyarrow:无
xarray:无
IPython:6.4.0
狮身人面像:1.7.4
麻痹:0.5.0
dateutil的:2.7.3
pytz:2018.4
blosc:无
瓶颈:1.2.1
表格:3.4.3
numexpr:2.6.5
羽毛:无
matplotlib:2.2.2
openpyxl:2.5.3
xlrd:1.1.0
xlwt:1.3.0
xlsxwriter:1.0.4
lxml:4.2.1
bs4:4.6.0
html5lib:1.0.1
sqlalchemy:1.2.7
pymysql:无
psycopg2:无
jinja2:2.10
s3fs:无
fastparquet:无
pandas_gbq:无
pandas_datareader:无

Bug Reshaping

最有用的评论

感谢您的解决方案https://github.com/pandas-dev/pandas/issues/23955#issuecomment -480804068。 如果它免除了麻烦,这是一个概括

def multiindex_pivot(df, columns=None, values=None):
    #https://github.com/pandas-dev/pandas/issues/23955
    names = list(df.index.names)
    df = df.reset_index()
    list_index = df[names].values
    tuples_index = [tuple(i) for i in list_index] # hashable
    df = df.assign(tuples_index=tuples_index)
    df = df.pivot(index="tuples_index", columns=columns, values=values)
    tuples_index = df.index  # reduced
    index = pd.MultiIndex.from_tuples(tuples_index, names=names)
    df.index = index
    return df

所有5条评论

有任何更新吗? 据我了解,当前pivot()方法不适用于多个索引器, index参数不接受列表,并且当None确实会失败,因为它试图使用现有的MultiIndex。

到目前为止,我通过生成单个索引作为原始索引的多个级别的串联,然后通过拆分串联的单个索引来构造MultiIndex的不同级别,以一种怪诞的方式解决了这一问题。 以下@srajanpaliwal示例:

(df.reset_index()
 .assign(new_index=lambda dd: dd['index_1'].str.cat(dd['index_2'], sep='_'))
 .pivot(index='new_index', columns='label', values='value')
 .assign(index_1=lambda dd: dd.index.str.split('_').str.get(0),
         index_2=lambda dd: dd.index.str.split('_').str.get(1))
 .set_index(['index_1', 'index_2']))

输出:

| | 标签| 标签1 | 标签2 |
| --------- | --------- | -------- | -------- |
| index_1 | index_1 | | |
| A | A1 | 1.0 | NaN |
| | A2 | NaN | 2.0 | |
| B | A1 | 3.0 | NaN |
|| A2 | NaN | 4.0 | |

无论哪种方式,是否有原因为什么pivot()操作不接受MultiIndex?

感谢您的解决方案https://github.com/pandas-dev/pandas/issues/23955#issuecomment -480804068。 如果它免除了麻烦,这是一个概括

def multiindex_pivot(df, columns=None, values=None):
    #https://github.com/pandas-dev/pandas/issues/23955
    names = list(df.index.names)
    df = df.reset_index()
    list_index = df[names].values
    tuples_index = [tuple(i) for i in list_index] # hashable
    df = df.assign(tuples_index=tuples_index)
    df = df.pivot(index="tuples_index", columns=columns, values=values)
    tuples_index = df.index  # reduced
    index = pd.MultiIndex.from_tuples(tuples_index, names=names)
    df.index = index
    return df

为了与数据透视图API保持一致,对@gmacario注释进行了少许调整

def multiindex_pivot(df, index=None, columns=None, values=None):
    #https://github.com/pandas-dev/pandas/issues/23955
    if index is None:
        names = list(df.index.names)
        df = df.reset_index()
    else:
        names = index
    list_index = df[names].values
    tuples_index = [tuple(i) for i in list_index] # hashable
    df = df.assign(tuples_index=tuples_index)
    df = df.pivot(index="tuples_index", columns=columns, values=values)
    tuples_index = df.index  # reduced
    index = pd.MultiIndex.from_tuples(tuples_index, names=names)
    df.index = index
    return df

用法:

df.pipe(multiindex_pivot, index=['idx_column1', 'idx_column2'], columns='foo', values='bar')

另一个细微的增强,它也允许多个columns= (未经彻底测试,但在我的示例中有效):

def multiindex_pivot(df, index=None, columns=None, values=None):
    # https://github.com/pandas-dev/pandas/issues/23955
    if index is None:
        names = list(df.index.names)
        df = df.reset_index()
    else:
        names = index
    df = df.assign(tuples_index=[tuple(i) for i in df[names].values])  # hashable
    df = df.assign(tuples_columns=[tuple(i) for i in df[columns].values])  # hashable
    df = df.pivot(index='tuples_index', columns='tuples_columns', values=values)
    df.index = pd.MultiIndex.from_tuples(df.index, names=names)  # reduced
    df.columns = pd.MultiIndex.from_tuples(df.columns, names=columns)  # reduced
    return df

用法:

df.pipe(multiindex_pivot,
        index=['idx_column1', 'idx_column2'],
        columns=['col_column1', 'col_column2'],
        values='bar')

另一个稍微改进的版本:

def multiIndex_pivot(df, index = None, columns = None, values = None):
    # https://github.com/pandas-dev/pandas/issues/23955
    output_df = df.copy(deep = True)
    if index is None:
        names = list(output_df.index.names)
        output_df = output_df.reset_index()
    else:
        names = index
    output_df = output_df.assign(tuples_index = [tuple(i) for i in output_df[names].values])
    if isinstance(columns, list):
        output_df = output_df.assign(tuples_columns = [tuple(i) for i in output_df[columns].values])  # hashable
        output_df = output_df.pivot(index = 'tuples_index', columns = 'tuples_columns', values = values) 
        output_df.columns = pd.MultiIndex.from_tuples(output_df.columns, names = columns)  # reduced
    else:
        output_df = output_df.pivot(index = 'tuples_index', columns = columns, values = values)    
    output_df.index = pd.MultiIndex.from_tuples(output_df.index, names = names)
    return output_df

用法:

df.pipe(multiIndex_pivot, index = ['idx_column1', 'idx_column2'], columns = ['col_column1', 'col_column2'], values = 'bar')
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